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visium spatial gene expression profiles spatial transcriptome analysis  (10X Genomics)

 
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    10X Genomics visium spatial gene expression profiles spatial transcriptome analysis
    Visium Spatial Gene Expression Profiles Spatial Transcriptome Analysis, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+transcriptomic+profiling+visium/data+spatial+transcriptomic/pm39632980-245-3-12
    Average 86 stars, based on 1 article reviews
    visium spatial gene expression profiles spatial transcriptome analysis - by Bioz Stars, 2026-10
    86/100 stars

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    Related Articles

    Spatial Transcriptomics:

    Article Title: Integration of Elemental Imaging and Spatial Transcriptomic Profiling for Proof-of-Concept Metals-Based Pathway Analysis of Colon Tumor Microenvironment.
    Article Snippet: .. Spatial Transcriptomics (ST) Profiling: Utilized the 10x Genomics Visium Spatial Gene Expression (spatial transcriptomic– ST) assay to capture spatial variations in the expression of approximately 18,000 genes across 55-micron spots. .. This was complemented by high-resolution 40X H&E-stained whole slide imaging (WSI; Leica Aperio GT450) on the same section.

    Gene Expression:

    Article Title: Integration of Elemental Imaging and Spatial Transcriptomic Profiling for Proof-of-Concept Metals-Based Pathway Analysis of Colon Tumor Microenvironment.
    Article Snippet: .. Spatial Transcriptomics (ST) Profiling: Utilized the 10x Genomics Visium Spatial Gene Expression (spatial transcriptomic– ST) assay to capture spatial variations in the expression of approximately 18,000 genes across 55-micron spots. .. This was complemented by high-resolution 40X H&E-stained whole slide imaging (WSI; Leica Aperio GT450) on the same section.

    Expressing:

    Article Title: Integration of Elemental Imaging and Spatial Transcriptomic Profiling for Proof-of-Concept Metals-Based Pathway Analysis of Colon Tumor Microenvironment.
    Article Snippet: .. Spatial Transcriptomics (ST) Profiling: Utilized the 10x Genomics Visium Spatial Gene Expression (spatial transcriptomic– ST) assay to capture spatial variations in the expression of approximately 18,000 genes across 55-micron spots. .. This was complemented by high-resolution 40X H&E-stained whole slide imaging (WSI; Leica Aperio GT450) on the same section.

    other:

    Article Title: Spatial transcriptomics reveal topological immune landscapes of Asian head and neck angiosarcoma
    Article Snippet: Spatial transcriptomic profiling using the 10X Genomics Visium platform was performed on representative cases characterized by presence or absence of UV signatures and/or HHV-7, revealing the topological tumor immune landscape of angiosarcoma.

    Formalin-fixed Paraffin-Embedded:

    Article Title: Meningeal solitary fibrous tumor cell states phenocopy cerebral vascular development and homeostasis.
    Article Snippet: .. Spatial transcriptomic profiling was performed on FFPE sections using the 10x Genomics Visium Spatial assay (1000336). ..

    Article Title: Spatial genomic, biochemical, and cellular mechanisms drive meningioma heterogeneity and evolution
    Article Snippet: .. Spatial transcriptomic profiling was performed on FFPE sections using the 10x Genomics Visium Spatial assay (v1, cat# 1000336). ..



    Similar Products

    visium spatial gene expression profiles spatial transcriptome analysis  (10X Genomics)
    86
    10X Genomics visium spatial gene expression profiles spatial transcriptome analysis
    Visium Spatial Gene Expression Profiles Spatial Transcriptome Analysis, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+transcriptomic+profiling+visium/data+spatial+transcriptomic/pm39632980-245-3-12
    Average 86 stars, based on 1 article reviews
    visium spatial gene expression profiles spatial transcriptome analysis - by Bioz Stars, 2026-10
    86/100 stars
    		  Buy from Supplier
    spatial transcription dataset fresh frozen visium on cytassist: humanbreast cancer, probe-based whole transcriptome profiling  (10X Genomics)
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    10X Genomics spatial transcription dataset fresh frozen visium on cytassist: humanbreast cancer, probe-based whole transcriptome profiling
    Identifying npCR-associated fibroblasts by integrating proteomics and single-cell sequencing data. (A) Volcano plot of differentially expressed proteins between the pCR and npCR groups. (B) Upregulated pathways in the npCR group based on GO term enrichment analysis of differentially expressed proteins. (C–D) Uniform Manifold Approximation and Projection (UMAP) of major cell populations in our study, different colored dots represent different cell types. (E–F) The pCR and npCR phenotypes were mapped from proteomics to scRNA-seq data. (G) Pseudotime trajectories of fibroblast. (H–I) The GO/KEGG enrichment based on the GSVA algorithm. (J) <t>Transcription</t> factor regulation of npCR-related fibroblast compared with other fibroblast. (K–L) The intercellular cross-talk analysis between fibroblast and other cells in TME.
    Spatial Transcription Dataset Fresh Frozen Visium On Cytassist: Humanbreast Cancer, Probe Based Whole Transcriptome Profiling, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+transcriptomic+profiling+visium/spatial+transcription+dataset+fresh+frozen+visium+on+cytassist++humanbreast+cancer++probe+based+whole+transcriptome+profiling/pmc11254208-140-1-18
    Average 90 stars, based on 1 article reviews
    spatial transcription dataset fresh frozen visium on cytassist: humanbreast cancer, probe-based whole transcriptome profiling - by Bioz Stars, 2026-10
    90/100 stars
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    Image Search Results


    Identifying npCR-associated fibroblasts by integrating proteomics and single-cell sequencing data. (A) Volcano plot of differentially expressed proteins between the pCR and npCR groups. (B) Upregulated pathways in the npCR group based on GO term enrichment analysis of differentially expressed proteins. (C–D) Uniform Manifold Approximation and Projection (UMAP) of major cell populations in our study, different colored dots represent different cell types. (E–F) The pCR and npCR phenotypes were mapped from proteomics to scRNA-seq data. (G) Pseudotime trajectories of fibroblast. (H–I) The GO/KEGG enrichment based on the GSVA algorithm. (J) Transcription factor regulation of npCR-related fibroblast compared with other fibroblast. (K–L) The intercellular cross-talk analysis between fibroblast and other cells in TME.

    Journal: International Journal of Surgery (London, England)

    Article Title: Integrative analysis identifies molecular features of fibroblast and the significance of fibrosis on neoadjuvant chemotherapy response in breast cancer

    doi: 10.1097/JS9.0000000000001360

    Figure Lengend Snippet: Identifying npCR-associated fibroblasts by integrating proteomics and single-cell sequencing data. (A) Volcano plot of differentially expressed proteins between the pCR and npCR groups. (B) Upregulated pathways in the npCR group based on GO term enrichment analysis of differentially expressed proteins. (C–D) Uniform Manifold Approximation and Projection (UMAP) of major cell populations in our study, different colored dots represent different cell types. (E–F) The pCR and npCR phenotypes were mapped from proteomics to scRNA-seq data. (G) Pseudotime trajectories of fibroblast. (H–I) The GO/KEGG enrichment based on the GSVA algorithm. (J) Transcription factor regulation of npCR-related fibroblast compared with other fibroblast. (K–L) The intercellular cross-talk analysis between fibroblast and other cells in TME.

    Article Snippet: The spatial transcription dataset (Fresh Frozen Visium on CytAssist: HumanBreast Cancer, Probe-Based Whole Transcriptome Profiling) was retrieved from 10X Genomics ( https://www.10xgenomics.com/ ).

    Techniques: Sequencing